Since CLAMP-Cancer is a stand-alone eclipse plugin, its folder structure is similar to other
eclipse plugins.
Configuration Folder:
This folder contains CLAMP-Cancer configuration files.
StartCLAMP:
This is the launching point for the CLAMP-Cancer GUI. In Windows,
this is an executable file while in Mac, this is an application.
This folder contains seven sub-folders:
If you want to use UMLS terminologies,
then you will need to create an UMLS account. Please follow the following link
to create an UMLS account if you do not have any.
https://uts.nlm.nih.gov//license.html
The following table lists libraries included in CLAMP-Cancer.
groupId | artifactId | version |
---|---|---|
org.cleartk | cleartk-ml-liblinear | 2.0.0 |
org.ini4j | ini4j | 0.5.2 |
org.apache.uima | uimafit-core | 2.1.0 |
com.google.code.gson | gson | 2.3 |
org.apache.uima | uimaj-core | 2.6.0 |
org.apache.uima | uimaj-document-annotation | 2.6.0 |
de.bwaldvogel | liblinear | 1.94 |
org.apache.lucene | lucene-core | 5.2.1 |
org.apache.lucene | lucene-analyzers-common | 5.2.1 |
org.apache.lucene | lucene-queryparser | 5.2.1 |
org.apache.opennlp | opennlp-tools | 1.5.1-incubating |
org.apache.ctakes | ctakes-type-system | 3.2.0 |
org.cleartk | cleartk-named-entity | 0.6.6 |
com.googlecode.clearnlp | clearnlp | 1.3.1 |
commons-codec | commons-codec | 20041127.091804 |
dom4j | dom4j | 1.6.1 |
org.apache.uima | ruta-ep-engine | 2.3.0 |
javax.servlet | servlet-api | 3.0-alpha-1 |
com.sun.jersey | jersey-client | 1.19 |
junit | junit | 4.12 |
commons-cli | commons-cli | 1.3 |
net.jodah | concurrentunit | 0.4.2 |
org.javatuples | javatuples | 1.2 |