To efficiently conduct clinical studies across different institutions within a network, one requirement is to normalize clinical data to common data models (CDM) and standard terminologies. Among different types of clinical data, COVID-19 diagnostic testings are extremely important for all the following analyses, as they are the primary means to identify the confirmed COVID-19 cases. To address the urgency of the pandemic, individual institutions have created local names and local codes for those new COVID-19 testings in their EHRs. Meanwhile, LOINC (The standard code system for laboratory observations), a widely used international standard for lab tests, has responded quickly by developing a new set of standard codes for COVID-19 testings, to guide standard coding of COVID-19 testings in clinical settings. Nevertheless, there is a lack of mappings between local COVID-19 testing names and standard LOINC codes, which hampers cross-institutional studies that rely on normalized clinical data at each institution.
Therefore, we developed an automated tool - COVID-19 TestNorm, to normalize a local COVID-19 testing name to a standard LOINC code. We believe COVID-19 TestNorm will be a useful tool for secondary use of EHRs for the pandemic, thus facilitating the global research of COVID-19. This tool is available to the community via an open source package at GitHub (Link).
We are following the LOINC guidelines for normalizing COVID-19 testing names to LOINC codes. Please enter a COVID-19 testing name below. If you have additional information about the testing such as specimen and manufacturer information, please concatenate them to the end of the testing name.
Example testing names are: